STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_4447sUncharacterized protein. (961 aa)    
Predicted Functional Partners:
MRPS35
28S ribosomal protein S35.
    
 0.994
CSKR_10643s
Uncharacterized protein.
   
0.990
MRPS9
28S ribosomal protein S9.
   
 0.990
MRPS31
28S ribosomal protein S31.
    
 0.988
MRPS5
28S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.985
CSKR_8950s
CHCH domain-containing protein.
    
0.983
Mrps2
28S ribosomal protein S2.
    
0.983
mRpS25
Putative 28S ribosomal protein S25.
   
 0.983
Mrps33
28S ribosomal protein S33 mitochondrial.
    
  0.983
mRpS24
28S ribosomal protein S24.
    
  0.982
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.