STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpped1Serine/threonine-protein phosphatase CPPED1. (770 aa)    
Predicted Functional Partners:
PUDP
Pseudouridine-5'-monophosphatase.
  
 
 0.770
Nadk
NAD kinase.
    
  0.769
SUV420H1
Histone-lysine N-methyltransferase SUV420H1.
     
 0.654
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
     
 0.653
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.620
apt
Adenine phosphoribosyltransferase.
  
 
 0.608
yfkN
Trifunctional nucleotide phosphoesterase protein YfkN; Belongs to the 5'-nucleotidase family.
   
 
 0.598
mggB
Trifunctional nucleotide phosphoesterase protein YfkN; Belongs to the 5'-nucleotidase family.
   
 
 0.598
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
    
  0.591
flad1
FAD synthase.
    
  0.586
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.