STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxl7F-box/LRR-repeat protein 7. (1042 aa)    
Predicted Functional Partners:
Skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.983
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.947
Cul3
Cullin-3; Belongs to the cullin family.
    
 0.901
RBX1A
RING-box protein 1a.
    
 0.840
Roc1a
RING-box protein 1A.
    
 0.840
PPP2CA
Serine/threonine-protein phosphatase.
    
 
 0.761
ppp2r2b
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.757
Ppp2r2a
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.757
Tceb1
Transcription elongation factor B polypeptide 1.
    
 0.748
sconB
Putative E3 ubiquitin ligase complex SCF subunit sconB.
    
 0.712
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.