STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csn2COP9 signalosome complex subunit. (445 aa)    
Predicted Functional Partners:
COPS6
COP9 signalosome complex subunit 6.
   
 0.998
Gps1
COP9 signalosome complex subunit 1.
   
 0.998
COPS4
COP9 signalosome complex subunit 4.
   
 0.998
cops3
COP9 signalosome complex subunit 3.
   
 0.998
CSN5
COP9 signalosome complex subunit 5.
   
 0.997
CSKR_14431s
C2H2-type domain-containing protein.
   
 0.995
COPS7B
COP9 signalosome complex subunit 7b.
    
 0.990
ppp1r42
Protein phosphatase 1 regulatory subunit 42.
   
 0.978
Cul2
Cullin-2; Belongs to the cullin family.
   
  0.973
CUL4A
Cullin-4A; Belongs to the cullin family.
   
 0.923
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.