STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rab2aRas-related protein Rab-2A. (345 aa)    
Predicted Functional Partners:
Itsn1
Intersectin-1.
    
 0.964
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.899
unc-89
Muscle M-line assembly protein unc-89.
   
 0.832
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.832
CSKR_11071s
Uncharacterized protein.
   
 0.832
SHANK3-2
SH3 and multiple ankyrin repeat domains protein 3.
    
 0.815
trio
Triple functional domain protein.
   
 0.785
trio-2
Triple functional domain protein.
   
 0.785
RAB14
Ras-related protein Rab-14.
  
 
0.770
RAB10
Ras-related protein Rab-10.
  
0.759
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.