STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS7Pseudouridylate synthase 7-like protein. (584 aa)    
Predicted Functional Partners:
mrpl15
39S ribosomal protein L15.
   
   0.923
mtg1
Mitochondrial ribosome-associated GTPase 1.
   
   0.921
CSKR_529s
Uncharacterized protein.
   
   0.920
MRPL21
39S ribosomal protein L21.
  
   0.920
rnmtl1b
rRNA methyltransferase 3B.
   
   0.918
MRPL43
39S ribosomal protein L43.
   
   0.914
mRpL24
Putative 39S ribosomal protein L24.
   
   0.913
ND-ACP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.912
MRPL47
39S ribosomal protein L47.
    
   0.912
MRPL3
39S ribosomal protein L3.
    
   0.912
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.