STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
camsap1bCalmodulin-regulated spectrin-associated protein 1-B. (604 aa)    
Predicted Functional Partners:
APPL2
DCC-interacting protein 13-beta.
   
 
 0.556
Wdr47
WD repeat-containing protein 47.
    
 
 0.551
KIF2A
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.519
pol-19
RNA-directed DNA polymerase from mobile element jockey.
    
 
 0.484
PLEC-2
Plectin.
    
 
 0.475
MACF1
Microtubule-actin cross-linking factor 1.
    
 
 0.475
CSKR_10035s
SH3_10 domain-containing protein.
    
 
 0.432
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.