STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_12563sUncharacterized protein. (71 aa)    
Predicted Functional Partners:
G3BP1
Ras GTPase-activating protein-binding protein 1.
   
 
 0.946
Trnau1ap
tRNA selenocysteine 1-associated protein 1.
    
 
 0.768
USP5
Ubiquitinyl hydrolase 1.
     
 0.741
tp53
Cellular tumor antigen p53.
    
 0.701
Usp4
Ubiquitin carboxyl-terminal hydrolase 4.
    
 0.683
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
  0.683
GGCT
Gamma-glutamylcyclotransferase.
    
 0.669
Snx3
Sorting nexin-3.
    
 0.657
ABCC1
Multidrug resistance-associated protein 1.
    
  0.637
ABCC1-2
Multidrug resistance-associated protein 1.
    
  0.637
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.