STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_11732sUncharacterized protein. (118 aa)    
Predicted Functional Partners:
Ddb1
DNA damage-binding protein 1.
    
 0.975
CUL4A
Cullin-4A; Belongs to the cullin family.
   
 0.954
samhd1
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1.
    
 
 0.889
UNG
Uracil-DNA glycosylase.
    
 
 0.818
RBX1A
RING-box protein 1a.
    
 
 0.632
Roc1a
RING-box protein 1A.
    
 
 0.632
ppp1r42
Protein phosphatase 1 regulatory subunit 42.
    
   0.523
CSN5
COP9 signalosome complex subunit 5.
    
   0.523
COPS6
COP9 signalosome complex subunit 6.
    
   0.459
cops3
COP9 signalosome complex subunit 3.
    
   0.454
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.