STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGPPhosphoglycolate phosphatase. (394 aa)    
Predicted Functional Partners:
PDXK
Pyridoxal kinase.
    
 0.819
CSKR_739s
Uncharacterized protein.
  
 
 0.811
ATPsynB
Mitochondrial ATP synthase B subunit.
     
 0.751
PNPO
Pyridoxine-5'-phosphate oxidase.
   
 
 0.717
PNPO-2
Pyridoxine-5'-phosphate oxidase.
   
 
 0.717
CSKR_9250s
Uncharacterized protein.
     
 0.703
PPA2
Inorganic pyrophosphatase 2.
     
 0.694
Atp6v0a1
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
     
 0.687
Vha26
V-type proton ATPase subunit E.
   
 
 0.683
CdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
 
  0.676
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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