STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIK3R4Phosphoinositide 3-kinase regulatory subunit 4. (1418 aa)    
Predicted Functional Partners:
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 0.999
CSKR_11068s
Uncharacterized protein.
    
 0.992
unc-51
Serine/threonine-protein kinase unc-51.
    
 0.991
Ulk3
Serine/threonine-protein kinase ULK3.
    
 0.974
Atg12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
     
 0.896
AMBRA1
Activating molecule in BECN1-regulated autophagy protein 1.
   
 
 0.893
atg3
Autophagy-related protein 3.
     
 0.883
WIPI2
WD repeat domain phosphoinositide-interacting protein 2.
     
 0.882
Atg5
Autophagy protein 5; Involved in autophagic vesicle formation.
     
 0.879
Atg13
Autophagy-related protein 13-like protein.
     
 0.877
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.