STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tni-4Troponin I 4. (237 aa)    
Predicted Functional Partners:
TNT
Troponin T.
  
0.997
CSKR_5570s
Myosin essential light chain.
  
 0.879
CSKR_6554s
Myosin catalytic light chain LC-1.
   
 0.853
CSKR_6555s
Myosin essential light chain.
   
 0.853
CSKR_2782s
Tropomyosin-2.
   
 0.852
CSKR_5388s
Tropomyosin.
   
 0.852
CSKR_5387s
Tropomyosin.
   
 0.852
CSKR_6012s
Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.839
zip
Myosin heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.839
SM20
20 kDa calcium-binding protein.
   
 0.822
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.