STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpap3RNA polymerase II-associated protein 3. (574 aa)    
Predicted Functional Partners:
ruvbl1
RuvB-like helicase.
    
 0.991
pih1d1
PIH1 domain-containing protein 1.
   
 
 0.976
ruvbl2
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.974
Arp5
Actin-related protein 5.
   
 0.937
wdr92
WD repeat-containing protein 92.
   
 0.910
hsp90a.1
Heat shock protein HSP 90-alpha 1.
   
 0.905
rpb-5
DNA-directed RNA polymerases I II and III subunit RPABC1.
    
 0.896
pih1d2
PIH1 domain-containing protein 2.
    
 
 0.873
Ino80c
INO80 complex subunit C.
    
 0.870
PFDN2
Prefoldin subunit 2.
    
 
 0.855
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.