STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND1C-2DENN domain-containing protein 1C. (808 aa)    
Predicted Functional Partners:
Rab35
Ras-related protein Rab-35.
    
 0.943
IFT27
Intraflagellar transport protein 27-like protein.
    
 0.874
Itsn1
Intersectin-1.
    
 
 0.656
CSKR_1975s
Putative sulfite oxidase.
      
 0.644
Rep
Rab proteins geranylgeranyltransferase component A.
   
 
  0.584
RAB10
Ras-related protein Rab-10.
     
 0.529
Gdi1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
     
 0.528
GDI1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
     
 0.528
14-3-3zeta
14-3-3 protein zeta; Belongs to the 14-3-3 family.
    
  0.500
GRF8
14-3-3-like protein GF14 kappa; Belongs to the 14-3-3 family.
    
  0.500
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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