STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_1243sHistone H3.2. (172 aa)    
Predicted Functional Partners:
CLF_105698
Histone H2B; Belongs to the histone H2B family.
 
 
 0.920
histh2b
Histone H2B; Belongs to the histone H2B family.
 
 
 0.920
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.821
h2afv
Histone H2A; Belongs to the histone H2A family.
 
 
 0.800
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.771
SETD1A
Histone-lysine N-methyltransferase SETD1A.
    
 0.770
Rbbp4
Histone-binding protein RBBP4.
   
 0.762
Rbbp5
Retinoblastoma-binding protein 5-like protein.
    
 0.758
Kdm6a
Lysine-specific demethylase 6A.
   
 0.757
Cbx5
Chromobox-like protein 5.
   
 0.755
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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