STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flwSerine/threonine-protein phosphatase beta isoform. (344 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.924
Wdr82
WD repeat-containing protein 82.
    
 0.891
WDR33
Pre-mRNA 3' end processing protein WDR33.
    
 0.879
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.777
Cpsf1
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.776
Fip1l1
Pre-mRNA 3'-end-processing factor FIP1.
    
 0.752
ppp4r2a
Serine/threonine-protein phosphatase 4 regulatory subunit 2-A.
    
 0.751
ppp2r2b
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.737
Ppp2r2a
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
   
 0.737
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.727
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.