STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_4513sV-SNARE coiled-coil homology domain-containing protein. (171 aa)    
Predicted Functional Partners:
Snap29
Synaptosomal-associated protein 29.
    
 0.976
CSKR_4372s
t-SNARE coiled-coil homology domain-containing protein.
   
 0.968
Itsn1
Intersectin-1.
     
 0.961
Stx7
Syntaxin-7.
   
 0.951
Snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.937
Vti1a
Vesicle transport through interaction with t-SNAREs-like protein 1A.
    
 0.931
Vps16
Vacuolar protein sorting-associated protein 16-like protein.
    
 
 0.903
Agfg1
Arf-GAP domain and FG repeat-containing protein 1.
    
 0.889
CSKR_6778s
Syntaxin; Belongs to the syntaxin family.
    
 0.887
CSKR_5099s
Syntaxin; Belongs to the syntaxin family.
    
 0.887
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.