STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIPEPMitochondrial intermediate peptidase. (614 aa)    
Predicted Functional Partners:
Xpnpep3
Putative Xaa-Pro aminopeptidase 3.
   
 
 0.677
pitrm1
Presequence protease.
    
 
 0.656
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
   
  
 0.639
PMPCB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
  
 0.630
unc-10
Rab-3-interacting molecule unc-10.
   
   0.617
Rims2
Regulating synaptic membrane exocytosis protein 2.
    
   0.615
ELAC1
Zinc phosphodiesterase ELAC protein 1.
  
  
 0.578
rpa-0
60S acidic ribosomal protein P0.
   
  
 0.578
FNTB
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.566
Oxa1l
Mitochondrial inner membrane protein OXA1L.
     
 0.558
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.