STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCNT2N-acetyllactosaminide beta-1. (347 aa)    
Predicted Functional Partners:
Sdc
Syndecan.
    
 0.595
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
    
 0.545
B4GALT7
Beta-1.
     
 0.472
B3GALT5
Hexosyltransferase.
     
 0.445
MAN1B1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
  
 0.414
GPATCH3
G patch domain-containing protein 3.
     
 0.414
B3GALT1
Hexosyltransferase.
     
 0.403
B3GALT1-2
Hexosyltransferase.
     
 0.403
B3GALT1-3
Hexosyltransferase.
     
 0.403
Man2a2
Alpha-mannosidase 2x.
      
 0.402
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.