STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_5031sSAM domain-containing protein. (696 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 0.960
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.799
Frem1
FRAS1-related extracellular matrix protein 1.
    
 0.783
ASF1
Histone chaperone ASF1.
    
 0.743
CSKR_6703s
Uncharacterized protein.
    
 0.734
Grb2
Growth factor receptor-binding protein 2.
    
 0.699
grb2-a
Growth factor receptor-bound protein 2-A.
    
 0.699
RPS15A
40S ribosomal protein S15a.
   
 
 0.656
hira
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.638
unc-10
Rab-3-interacting molecule unc-10.
    
  0.632
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.