STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbbp4Histone-binding protein RBBP4. (175 aa)    
Predicted Functional Partners:
NYNRIN
Protein NYNRIN.
    
 0.962
Caf1
Putative histone-binding protein Caf1.
 
     0.945
Hat1
Histone acetyltransferase type B catalytic subunit.
   
 0.942
Su(z)12
Polycomb protein Su(Z)12.
    
 0.935
EED
Polycomb protein EED.
    
 0.934
E(z)
Histone-lysine N-methyltransferase E(Z).
    
 0.932
CSKR_8883s
Mortality factor 4-like protein 1.
   
 0.926
CHD4
Chromodomain-helicase-DNA-binding protein 4.
   
 0.917
Smarca1
Putative global transcription activator SNF2L1.
   
 0.901
aebp2
Zinc finger protein AEBP2.
    
 0.899
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.