STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_4988sSBF2 domain-containing protein. (188 aa)    
Predicted Functional Partners:
Gbe1
Putative 1.
  
 
 0.824
ATHL1
Acid trehalase-like protein 1.
  
 
 0.779
PGM1
Phosphoglucomutase-1.
  
 
 0.739
SLC7A8
Large neutral amino acids transporter small subunit 2.
   
 0.730
SLC7A6
Y+L amino acid transporter 2.
   
 0.730
Slc7a6
Y+L amino acid transporter 2.
   
 0.730
SLC7A6-2
Y+L amino acid transporter 2.
   
 0.730
Slc7a6-2
Y+L amino acid transporter 2.
   
 0.730
SLC7A8-2
Large neutral amino acids transporter small subunit 2.
   
 0.730
SLC7A6-3
Y+L amino acid transporter 2.
   
 0.730
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.