STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps25Vacuolar protein-sorting-associated protein 25. (226 aa)    
Predicted Functional Partners:
Snf8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.998
Vps36
Vacuolar protein-sorting-associated protein 36.
   
 0.998
chmp4b
Charged multivesicular body protein 4b.
    
 0.934
chmp2a
Charged multivesicular body protein 2a.
   
 0.926
TSG101
Tumor susceptibility-like protein.
   
 0.904
MVB12B
Multivesicular body subunit 12B.
    
 0.885
chmp3
Charged multivesicular body protein 3.
     
 0.867
CHMP7
Charged multivesicular body protein 7.
    
 0.863
VPS28
Vacuolar protein sorting-associated protein 28-like protein.
   
 0.851
VPS28-2
Vacuolar protein sorting-associated protein 28-like protein; Belongs to the VPS28 family.
   
 0.851
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.