STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_1884sUncharacterized protein. (822 aa)    
Predicted Functional Partners:
EEF1G
Elongation factor 1-gamma.
   
 
 0.999
RpL32
60S ribosomal protein L32.
  
 0.996
rpl5-a
60S ribosomal protein L5-A.
  
 0.996
mrpl22
39S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
  
 0.996
rpl7a
Large subunit ribosomal protein L7Ae.
  
 0.996
rpl-23
Large subunit ribosomal protein L23e; Belongs to the universal ribosomal protein uL14 family.
  
 0.996
RPL12
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 0.995
rpl27a
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.995
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.995
RpL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.995
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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