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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Robo1Roundabout-like protein 1. (1661 aa)    
Predicted Functional Partners:
sli
Protein slit.
   
 0.846
Slit1
Slit-like protein 1 protein.
   
 0.846
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.762
ena
Protein enabled.
    
 0.744
Igsf10
Immunoglobulin superfamily member 10.
   
 0.703
CSKR_4448s
Uncharacterized protein.
   
 0.703
CSKR_10650s
Uncharacterized protein.
   
 0.703
CSKR_10651s
Uncharacterized protein.
   
 0.703
CSKR_10646s
Uncharacterized protein.
   
 0.703
CLF_102428
Acidic fibroblast growth factor intracellular binding protein.
   
 0.703
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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