STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIF6Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (814 aa)    
Predicted Functional Partners:
KAP115
Kinesin-associated protein 3.
   
 0.797
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5.
    
 0.694
bap1
Ubiquitin carboxyl-terminal hydrolase BAP1.
    
 0.694
Ift80
Intraflagellar transport protein 80-like protein.
    
 0.623
ift122
Intraflagellar transport protein-like protein.
    
 0.593
OGT
UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase.
    
 0.558
Prdm4
PR domain zinc finger protein 4.
    
  0.551
Smyd3
Histone-lysine N-methyltransferase SMYD3.
    
  0.551
Prdm9-2
Histone-lysine N-methyltransferase PRDM9.
    
  0.551
ARF4
ADP-ribosylation factor 4.
    
  0.549
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.