STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_9537sUncharacterized protein. (362 aa)    
Predicted Functional Partners:
Dcaf7
DDB1-and CUL4-associated factor 7.
   
 
 0.908
Plk1
Serine/threonine-protein kinase PLK1.
    
 
 0.682
sumo2-a
Small ubiquitin-related modifier.
    
 0.644
Crebbp
CREB-binding protein.
   
  0.637
EP300
Histone acetyltransferase.
   
  0.637
tp53
Cellular tumor antigen p53.
    
 0.613
ube2i
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.601
PIN1
Peptidyl-prolyl cis-trans isomerase.
    
  0.593
Rbbp4
Histone-binding protein RBBP4.
    
  0.583
ATM
Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family.
    
 0.573
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.