STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTPBP1GTP-binding protein 1. (878 aa)    
Predicted Functional Partners:
mars-2
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.644
NUDCD3
NudC domain-containing protein 3.
      
 0.561
CSKR_2953s
Uncharacterized protein.
      
 0.529
DUT
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
   
  
 0.509
Eif2s3y
Eukaryotic translation initiation factor 2 subunit 3.
    
 
 0.499
Aats-met-m
Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.483
mars
Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.461
NPC1
Niemann-Pick C1 protein.
   
  
 0.457
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.