STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNL1Fidgetin-like protein 1; Belongs to the AAA ATPase family. (468 aa)    
Predicted Functional Partners:
IST1
IST1-like protein.
    
 0.868
chmp3
Charged multivesicular body protein 3.
   
 0.818
Ufd1l
Ubiquitin fusion degradation protein 1-like protein.
    
 0.784
Napa
Alpha-soluble NSF attachment protein.
    
 0.783
CSKR_2172s
Uncharacterized protein.
    
 0.763
YOD1
Ubiquitin thioesterase OTU1.
   
 0.761
ZFAND4
AN1-type zinc finger protein 4.
    
 0.744
ZFAND4-2
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.744
ubxn1
UBX domain-containing protein 1.
    
 0.740
Atxn3
Ataxin-3.
    
 0.738
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.