STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4339S ribosomal protein L43. (195 aa)    
Predicted Functional Partners:
Mrps2
28S ribosomal protein S2.
   
 
 0.991
Mrpl49
39S ribosomal protein L49.
   
 
 0.990
MRPL46
39S ribosomal protein L46.
   
 
 0.990
MRPL44
39S ribosomal protein L44.
   
 
 0.985
MRPL16
39S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
  0.984
mrpl22
39S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.982
CSKR_529s
Uncharacterized protein.
   
   0.981
MRPS9
28S ribosomal protein S9.
   
   0.981
Mrpl4
39S ribosomal protein L4.
   
 
 0.980
Rps13
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.980
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.