STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL4ACullin-4A; Belongs to the cullin family. (677 aa)    
Predicted Functional Partners:
Ddb1
DNA damage-binding protein 1.
   
 0.995
dtl
Denticleless-like protein.
    
 0.990
VPRBP
Protein VPRBP.
   
 0.985
CAND1
Cullin-associated Nedd8-dissociated protein 1.
   
 0.981
ERCC8
DNA excision repair protein ERCC-8.
    
 0.976
CSN5
COP9 signalosome complex subunit 5.
    
 0.961
COPS4
COP9 signalosome complex subunit 4.
    
 0.955
CSKR_11732s
Uncharacterized protein.
   
 0.954
RBX1A
RING-box protein 1a.
    
 0.948
Roc1a
RING-box protein 1A.
    
 0.948
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.