STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_7131sProtein Hikeshi. (222 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 
 0.960
HSPA9
Stress-70 protein; Belongs to the heat shock protein 70 family.
   
 0.691
HSPA5
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.687
nup35
Nuclear pore complex protein Nup53.
     
 0.653
Dnajb13
DnaJ-like protein subfamily B member 13.
   
  0.631
Men1
Menin.
   
  0.631
Dnajb4
DnaJ-like protein subfamily B member 4.
   
  0.631
CSKR_13404s
DnAJ-like protein.
   
  0.631
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
     
 0.630
dnajb6-a
DnaJ-like protein subfamily B member 6-A.
   
  0.623
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.