STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC14Tetratricopeptide repeat protein 14. (695 aa)    
Predicted Functional Partners:
CSKR_4529s
Uncharacterized protein.
   
  0.738
CSKR_5509s
Uncharacterized protein.
    
 0.718
Ift81
Intraflagellar transport protein 81-like protein.
    
 0.712
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.704
Ift88
Intraflagellar transport protein 88-like protein.
    
 0.686
IFT52
Intraflagellar transport protein 52-like protein.
    
 0.678
IFT57
Intraflagellar transport protein 57-like protein.
    
 0.656
Ift80
Intraflagellar transport protein 80-like protein.
    
 0.650
ift172
Intraflagellar transport protein-like protein.
    
 0.647
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.633
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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