Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKDD1AAnkyrin repeat and death domain-containing protein 1A. (765 aa)    
Predicted Functional Partners:
unc-89
Muscle M-line assembly protein unc-89.
    
  0.713
unc-89-2
Muscle M-line assembly protein unc-89.
    
  0.713
CSKR_11071s
Uncharacterized protein.
    
  0.713
DRC7
Dynein regulatory complex subunit 7.
    
 
 0.640
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.602
Ptk7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.601
Ank3-3
Ankyrin-3.
 
 
 
0.601
CLF_104181
Protein jagged-1a.
   
 0.586
Ift81
Intraflagellar transport protein 81-like protein.
    
 0.548
rps3-b
Small subunit ribosomal protein S3e; Belongs to the universal ribosomal protein uS3 family.
    
 0.527
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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