STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T26G10.1Putative ATP-dependent RNA helicase T26G10.1; Belongs to the DEAD box helicase family. (535 aa)    
Predicted Functional Partners:
Utp3
Something about silencing protein 10.
   
  0.937
CSKR_12896s
Uncharacterized protein.
   
 0.922
ESF1
ESF1-like protein.
   
 
 0.864
FTSJ3
Pre-rRNA processing protein FTSJ3.
   
 0.852
pes1
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.845
EBNA1BP2
Putative rRNA-processing protein EBP2.
   
 0.842
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.833
WDR46
WD repeat-containing protein 46.
   
 0.833
nst-1
Guanine nucleotide-binding protein-like 3-like protein.
  
 0.823
PDCD11
Protein RRP5-like protein.
   
 0.812
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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