STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_1294sLysosomal aspartic protease; Belongs to the peptidase A1 family. (226 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.612
ctsd
Cathepsin D; Belongs to the peptidase A1 family.
  
     0.508
REN
Renin; Belongs to the peptidase A1 family.
  
     0.500
CTSE-2
Cathepsin E; Belongs to the peptidase A1 family.
  
     0.499
CSKR_8680s
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
  
     0.496
CSKR_4945s
Pepsin-2B; Belongs to the peptidase A1 family.
  
     0.493
Pgc-2
Gastricsin; Belongs to the peptidase A1 family.
  
     0.488
PGA-2
Pepsin A; Belongs to the peptidase A1 family.
  
     0.483
REN-3
Renin; Belongs to the peptidase A1 family.
  
     0.482
CSKR_14491s
Pregnancy-associated glycoprotein 4; Belongs to the peptidase A1 family.
  
     0.473
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.