STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Txnl1Thioredoxin-like protein 1. (272 aa)    
Predicted Functional Partners:
Rpn11
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.920
CSN5
COP9 signalosome complex subunit 5.
   
 
 0.830
Psmc3
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
   0.650
TMX1
Thioredoxin-related transmembrane protein 1.
    
 0.632
Ero1L
Ero1-like protein.
     
 0.619
CSKR_11589s
26S proteasome non-ATPase regulatory subunit 4.
   
 
 0.618
TXN2
Thioredoxin 1.
  
 
0.613
ppp1r42
Protein phosphatase 1 regulatory subunit 42.
   
 
 0.612
Psmc6
26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.
   
   0.598
CCT2
T-complex protein 1 subunit beta.
   
  0.598
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.