STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_8330sUncharacterized protein. (544 aa)    
Predicted Functional Partners:
RIC1
RAB6A-GEF complex partner protein 1.
    
 0.985
Rab6a
Ras-related protein Rab-6A.
    
 0.861
Rab6
Ras-related protein Rab6.
    
 0.790
COG8
Conserved oligomeric Golgi complex subunit 8.
    
 0.757
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.728
Arl1
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.708
STX16
Syntaxin-16; Belongs to the syntaxin family.
    
 0.699
Vps53
Vacuolar protein sorting-associated protein 53-like protein.
     
 0.690
ARFRP1
ADP-ribosylation factor-related protein 1.
    
  0.688
scat
Vacuolar protein sorting-associated protein 54.
     
 0.675
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.