STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NALCNSodium leak channel non-selective protein. (1505 aa)    
Predicted Functional Partners:
Unc79
Protein unc-79-like protein.
   
 0.999
UNC80
Protein unc-80-like protein.
   
 0.990
CACNB2
Voltage-dependent L-type calcium channel subunit beta-2.
   
 0.814
Cacna2d4
Voltage-dependent calcium channel subunit alpha-2/delta-4.
   
 0.759
Cacna2d2
Voltage-dependent calcium channel subunit alpha-2/delta-2.
   
 0.759
Wdr35
WD repeat-containing protein 35.
    
 0.748
ift122
Intraflagellar transport protein-like protein.
   
 0.744
IFT140
Intraflagellar transport protein-like protein.
    
 0.738
Wdr19
WD repeat-containing protein 19.
    
 0.738
CLF_100094
Uncharacterized protein.
    
 0.683
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.