STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_11292sUncharacterized protein. (328 aa)    
Predicted Functional Partners:
ITGB1
Integrin beta.
    
 0.919
Rhou
Rho-related GTP-binding protein RhoU.
   
 0.878
racF2
Rho-related protein racF2.
   
 0.878
Rac1
Ras-related C3 botulinum toxin substrate 1.
   
 0.878
Cdc42
Cell division control protein 42.
   
 0.878
ARHGEF7
Rho guanine nucleotide exchange factor 7.
    
 0.858
NCK1
Cytoplasmic protein NCK1.
    
 0.811
NCK2
Cytoplasmic protein NCK2.
    
 0.811
GIT2
ARF GTPase-activating protein GIT2.
    
 0.758
Limk1
LIM domain kinase 1.
    
 0.753
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.