STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIGN-2GPI ethanolamine phosphate transferase 1. (1009 aa)    
Predicted Functional Partners:
Pigv
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 0.953
pigb
Mannosyltransferase.
    
 0.948
PIGN
GPI ethanolamine phosphate transferase 1.
  
  
 
0.914
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.738
AK9
Adenylate kinase 9.
   
 
  0.734
PIGT
Phosphatidylinositol glycan class T.
    
 0.617
Nadk
NAD kinase.
   
 
  0.588
Tyms
Thymidylate synthase.
    
  0.581
KDSR
3-ketodihydrosphingosine reductase.
     
 0.577
PIGA
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
     
 0.548
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.