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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jade1Protein Jade-1. (874 aa)    
Predicted Functional Partners:
meaf6
Chromatin modification-related protein MEAF6.
    
 0.843
ING4
Inhibitor of growth protein.
    
 0.815
CSKR_8649s
Uncharacterized protein.
    
 0.637
KAT6B
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.637
KAT7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.637
Tip60
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.637
ING3
Inhibitor of growth protein.
    
 0.614
CSKR_9275s
Uncharacterized protein.
    
 0.601
ING2
Inhibitor of growth protein 2.
    
 0.601
CSKR_2253s
Uncharacterized protein.
    
 0.601
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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