STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Golga1Golgin subfamily A member 1. (861 aa)    
Predicted Functional Partners:
VPS51
Vacuolar protein sorting-associated protein 51-like protein.
     
 0.506
Rab6a
Ras-related protein Rab-6A.
    
 0.505
scat
Vacuolar protein sorting-associated protein 54.
     
 0.505
tssc1
Protein TSSC1.
      
 0.439
TMF1
TATA element modulatory factor.
   
 
  0.437
Vps50
Syndetin.
      
 0.420
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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