STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRMT3Protein arginine N-methyltransferase 3; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (1404 aa)    
Predicted Functional Partners:
RpS2
Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family.
    
 0.886
Tsr1
Pre-rRNA-processing protein TSR1-like protein.
   
  0.793
bysl
Bystin.
   
 0.779
Srsf4
Serine/arginine-rich splicing factor 4.
   
 
 0.765
SETD1A
Histone-lysine N-methyltransferase SETD1A.
    
 0.756
RRP12
RRP12-like protein.
   
   0.753
TRMT112
Multifunctional methyltransferase subunit Uncharacterized protein.
   
 0.745
DDX21
Nucleolar RNA helicase 2.
   
 0.740
Ddx17
Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family.
   
 0.740
MRPS5
28S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.731
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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