STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AARSAlanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. (987 aa)    
Predicted Functional Partners:
CDC16
Cell division cycle protein 16-like protein.
   
 0.943
ANAPC4
Anaphase-promoting complex subunit 4.
   
 0.940
CSKR_13094s
Uncharacterized protein.
   
 0.938
ANAPC1
Anaphase-promoting complex subunit 1.
    
 0.937
ALA1
Alanine--tRNA ligase.
  
  
 
0.936
Anapc2
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.936
BUB1B
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
    
 0.929
Eprs
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.914
Yars
Tyrosine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.897
yars
Tyrosine--tRNA ligase.
  
 
 0.897
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.