STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH11Y-3Protocadherin-11 Y-linked. (1371 aa)    
Predicted Functional Partners:
Pkp4
Plakophilin-4.
    
 0.582
ARMC2
Armadillo repeat-containing protein 2.
    
 0.582
alpha-Cat
Catenin alpha.
    
 0.530
pol-17
RNA-directed DNA polymerase from mobile element jockey.
    
 0.530
CSKR_9781s
Uncharacterized protein.
    
  0.526
CSKR_3945s
Uncharacterized protein.
    
  0.526
UCK2
Uridine-cytidine kinase 2.
    
  0.526
UCKL1
Uridine kinase; Belongs to the uridine kinase family.
    
  0.526
CSKR_3572s
Catenin beta.
    
  0.526
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.514
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.