STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc4Tetratricopeptide repeat protein 4-like protein. (344 aa)    
Predicted Functional Partners:
CLF_109826
FAM203 family protein GA19338.
   
 
 0.974
Trap1
Heat shock protein 75 kDa.
   
 0.886
hsp90a.1
Heat shock protein HSP 90-alpha 1.
   
 0.879
CYP-1
Peptidyl-prolyl cis-trans isomerase 1.
  
 0.799
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.795
Ttc26
Intraflagellar transport protein 56.
    
 0.771
Tep1
Telomerase protein component 1.
    
 0.740
PAF1
RNA polymerase II-associated factor 1-like protein.
   
 0.737
CLF_105324
Prostaglandin E synthase 3.
   
 0.733
ANAPC4
Anaphase-promoting complex subunit 4.
   
 0.721
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.