STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSKR_14557sUncharacterized protein. (107 aa)    
Predicted Functional Partners:
daf-12
Nuclear hormone receptor family member daf-12.
    
 0.611
nhr-48
Nuclear hormone receptor family member nhr-48.
    
 0.611
COX15
Cytochrome c oxidase assembly protein COX15-like protein.
    
 0.594
RXRG
Retinoic acid receptor RXR-gamma.
    
  0.550
Rxra
Retinoic acid receptor RXR-alpha.
    
  0.550
ATP5A1
ATP synthase subunit alpha.
    
 
 0.519
Atp5c1
ATP synthase subunit gamma.
   
   0.509
ATP5D
ATP synthase subunit delta.
    
   0.493
Igbp1
Immunoglobulin-binding protein 1.
    
 0.489
Gbe1
Putative 1.
   
 
  0.485
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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