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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAZ2BBromodomain adjacent to zinc finger domain protein 2B. (2013 aa)    
Predicted Functional Partners:
Smarca1
Putative global transcription activator SNF2L1.
    
 0.930
POLE3
DNA polymerase epsilon subunit 3.
    
 
 0.813
dom-2
Helicase domino.
    
 0.780
CHD1L
Chromodomain-helicase-DNA-binding protein 1-like.
    
 0.780
Hells
Lymphocyte-specific helicase.
    
 0.780
ERCC6
DNA excision repair protein ERCC-6.
    
 0.712
SF3B1
Splicing factor 3B subunit 1.
   
 0.662
ercc6l
DNA excision repair protein ERCC-6-like.
   
 0.660
H2AFY
Core histone macro-H2A.1.
    
 0.653
CHD7
Chromodomain-helicase-DNA-binding protein 7.
   
 0.643
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.