STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gigyf2-2PERQ amino acid-rich with GYF domain-containing protein 2. (1164 aa)    
Predicted Functional Partners:
cgh-1
ATP-dependent RNA helicase cgh-1; Belongs to the DEAD box helicase family.
    
 
 0.902
CSKR_7350s
UBA domain-containing protein.
   
 
 0.664
CSKR_3888s
Uncharacterized protein.
   
 
 0.664
CSKR_11321s
Uncharacterized protein.
    
 
 0.609
CSKR_5217s
Uncharacterized protein.
    
 
 0.513
znf598
Zinc finger protein.
    
 
 0.446
GRB14
Growth factor receptor-bound protein 14.
    
 
 0.417
DDX56
Putative ATP-dependent RNA helicase DDX56.
   
 
 0.416
Gak
Cyclin-G-associated kinase.
   
  
 0.416
U2af50
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.416
Your Current Organism:
Clonorchis sinensis
NCBI taxonomy Id: 79923
Other names: C. sinensis, oriental liver fluke
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.